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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932020.1_cds_XP_016478630.1_70254
CDS Infomation

[gene=LOC107800004] [db_xref=GeneID:107800004] [protein=superoxide dismutase [Fe], chloroplastic-like isoform X1] [protein_id=XP_016478630.1] [location=complement(join(15040..15129,15218..15241,15379..15405,15515..15588,15697..15868,16297..16485,17481..17555,17750..17796,17876..17939))] [gbkey=CDS]
Sequence

ATGATGATGGCCGCTACTACTGCTTCTGCTAATTCACTGACCTCTGCTTTTCTTCCCCGC
CTAGGATTTCATGGGTCATCTCACAAGAGCCTACAATTGAGAACCCAAAAGAAACAGTTT
GCAAGAAAAGCTGGTTCTGGCACAATAACAGCTAAATTTGAACTCCAGTCTCCTCCTTAT
CCTATGGATGCTTTGGAGCCTCACATGAGTAGTCGAACGTTTGAATTCCACTGGGGGAAG
CATCACAGAGCTTATGTCGACAACTTAAACAAGCAAATAGACGGAACAGAACTAGATGGA
AAGACACTAGAAGACATAATACTTGTTACATATAATAAAGGTGCTCCCCTCCCAGCATTC
AACAATGCAGCTCAGGCCTGGAATCATCAGTTTTTCTGGGAATCAATGAAGCCCAACGGA
GGAGGAGAGCCATCTGGTGAATTATTAGAACTAATCAACAGAGACTTTGGTTCCTATGAT
GCATTTGTTAAAGAATTTAAGGCAGCTGCGGCAACACAATTTGGCTCTGGTTGGGCCTGG
CTCGCGTACAAACCTGAGGAGAAAAAGCTTGCCTTGGTGAAAACTCCTAATGCTGAAAAT
CCTCTTGTTTTGGGTTACACACCGCTCCTCACCATAGACGTTTGGGAGCATGCCTACTAT
CTGGACTTTCAGAACCGGCGGCCTGACTACATATCCATCTTTATGGAGAAGCTCGCGTCG
TGGGAAGCAGTCAGTTCTAGGCTTAAAGCAGCAACAGCTTGA

Peptide Sequence

PEP ID

XP_016478630.1
PEP Infomation

PREDICTED: superoxide dismutase [Fe], chloroplastic-like isoform X1 [Nicotiana tabacum]
Sequence

MMMAATTASANSLTSAFLPRLGFHGSSHKSLQLRTQKKQFARKAGSGTITAKFELQSPPY
PMDALEPHMSSRTFEFHWGKHHRAYVDNLNKQIDGTELDGKTLEDIILVTYNKGAPLPAF
NNAAQAWNHQFFWESMKPNGGGEPSGELLELINRDFGSYDAFVKEFKAAAATQFGSGWAW
LAYKPEEKKLALVKTPNAENPLVLGYTPLLTIDVWEHAYYLDFQNRRPDYISIFMEKLAS
WEAVSSRLKAATA

Transcript Sequence

Gene sequence data has not been registered.